Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDISIFREYDIRGIYPTTLDENTAFSIGVELG-KIMREYDKSVFVGHDARVHGRFLFEVLSAGLQSSGLKVYDLGLIPTPVAYFAAFNEIDNIQCPNSIMITGSHNPKEYNGFKITLNQNPFYGKDIQALKNTLLNAKHEIKPLKETPEKVNALEAYHRYLIKDFKHLKNLKYKIALDFGNGVGALGLEPILKALNIDFSSLYSDPDGDFPNHHPDPSEAKNLKDLEKHMRENAILIGFAFDGDADRIAMLS-SHHIYAGDELAILFAKRLHAQGITPFVIGEVKCSQVMYNAINTFG-KTLMYKTGHSNLKIKLKETNAHFAAEMSGHIFFKERYFGYDDALYACLRALELLLEQSPSDLENTIKNLPYSYTTPEEKIAVSEEEKFEIIRNLQEALKNPPSHFPTIKEIISIDGVRVVFEHGFGLIRASNTTPYLVSRFEGKDETTALEYKRALLGLLEKL |
| 1PCM Chain:X ((12-438)) | ---SIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAA----NVLEGKSGVMLTGSHNPPDYNGFKIVVAGETLANEQIQALRERI--EKNDLASGVGSVEQVDILPRYFKQIRDDIAMAKPMK--VVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLE-ILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEGN------ITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PCM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -211609 for 3900 contacts (-54.3/contact) +
2D Compatibility (PS) -46360 + (NN) -29001 + (LL) 1540
1D Compatibility (HY) -37600 + (ID) 8850
Total energy: -331880.0 ( -85.10 by residue)
QMean score : 0.515
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