Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFGLKQFYQNEVRAKLAQELDIKNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLVAGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRNGFDGRGNYTFGINEQLIFPEVVYDDIMVSHGMNITMVTSTDNDKEAFKLLELLGLPFAKVR
1MJI Chain:A ((6-182))
--ALKRKYYEEVRPELIRRFGYQNVWEVPRLEKVVINQGLGEAKEDARILEKAAQELALITGQKPAVTRAKKSISNFKLRKGMPIGLRVTLRRDRMWIFLEKLLNVALPRIRDFRGLNPNSFDGRGNYNLGLREQLIFPEITYDMVDALRGMDIAVVTTAETDEEARALLELLGFPFRK--
General information:
TITO was launched using:
RESULT:
Template:
1MJI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100731 for 1289 contacts (-78.1/contact) +
2D Compatibility (PS) -19297 + (NN) -7048 + (LL) 632
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -148844.0 ( -115.47 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_1MJI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJI-query.scw
PDB file :
Tito_Scwrl_1MJI.pdb
: