Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHDFLKAFKDAFPHTISIFLGYLLMGMTFGMLLAQQGYDYKVALFMSLFIYAGAIQFVAITLLSAQASLMNVVIVSLLVNARQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIAIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC |
1AFO Chain:A ((93-100)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YGIRRLIK- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -435 for 23 contacts (-18.9/contact) +
2D Compatibility (PS) -651 + (NN) 1243 + (LL) 20676
1D Compatibility (HY) -800 + (ID) 50
Total energy: 19983.0 ( 868.83 by residue)
QMean score : 0.793
|
|
|