Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLETTIDFSRYSSVKIGAPLKVSVLENDNEISQEHQIIGLANNLLIAPDVKNLAL--LGKNYDYICDKGEWVEVGGAANASKIFNYFRANDLE----GLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACV----NGEWLE--KEALGLDYRSSGFN-------------------------GVVLRARFKK----THGFREGVLKACKSMRKSHPK---LPNFGSCFKNPPND--------------------------YAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR |
| 4JAY Chain:A ((52-336)) | ------------------------------------VIGGGSNLLLTRDVEALVLRMASQGRRIVSDAADSVLV--EAEAGEAWDPFVQWSLERGLAGLENLSLIPGTVGAAPMQNIGAYGVELKDVFDSLTALDRQDGTLREFDRQACRFGYRDSLFKQEPDRWLILRVRLRLTRRERLHLDYGPV-RQRLEEEGIASPTARDVSRVICAIRREKLPDPAVLGNAGSFFKNPLVDATQAERLRQAFPDLVGYPQADGRLKLAAGWLIDKGGWKGFRDGPVGVHAQQALVLVNHGGATGAQVRALAERIQEDVRRRFGVELEPEPNLY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75150 for 1510 contacts (-49.8/contact) +
2D Compatibility (PS) -22568 + (NN) -2881 + (LL) 2584
1D Compatibility (HY) -6800 + (ID) 3850
Total energy: -108665.0 ( -71.96 by residue)
QMean score : 0.319
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