Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLQTHRVLQALIGHFTPFLESG-ITELIINTEQELWLYKINNTREKRGHVLFDKAFLLRFCEQLASFRGLFFDEEHPTLNCSIPFTRYRVSANHFSITTNNQITLNIRVPRLKPLSLEDFT----FKVSNPES-------LKNLALKGHN---------------ILISGETSSGKTSLLNALLDCVNKDERVVSVEDSQELDLKAFSNCVGLL--VGKQENTRFNYEDALNMAMRLNPDRLIVGEIDTRNAALFLRLGNTGHKGMLSTIHANSAQNTLEALSLN-LSMRYTHSLDKDLMRAYFKSAIDVIVHVNKINNERQIAEVLWTKEL |
| 2GZA Chain:A ((31-315)) | ------------------PWLDDPQITEVCVNRPGEVFCER-ASAWEYYAVPNLDYEHLISLGTATARFVDQDISDSRPVLSAILPMGE-RIQIVRPPACEHGTISVTIRKPSFTRRTLEDYAQQGFFKHVRPMSKSLTPFEQELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPELFLPDHPNHVHLFYP--------VTAATLLRSCLRMKPTRILLAELRGGEAYDFINVAASGHGGSITSCHAGSCELTFERLALMVLQNRQGRQLPYEIIRRLLYLVVDVVVHVHNGVHDGTGRHISEVWYD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127567 for 1740 contacts (-73.3/contact) +
2D Compatibility (PS) -26809 + (NN) -15878 + (LL) 2600
1D Compatibility (HY) -16000 + (ID) 3650
Total energy: -187304.0 ( -107.65 by residue)
QMean score : 0.416
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