Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKRIVLLGALGVLANAEESAAFVGVNYQVSMIQNQTKMVNDNGLQKPLIKFPPYAGPGFEVGYKQFFGKKKWFGMRYYGFFDYAHNRFGVMKKGIPVGESGFIYNSFSFGGNTLTERDSYQGQYYINLFTYGVGLDTLWNFV-NKENMVFGFVVGIQLAGDSWATSISKEIGSYVKHHSNSSYSPANFQFLWKFGVRTHIAIHNSLELGIKVPTITHRLFFITNEKGYTLQADVRRVYAFQISYLRDF |
2VEB Chain:A ((57-140)) | ---------------------------------------------------------------------------------------------------------------------------------------LDTWYGFVGSHPHLLYYFTSPDGTPNEKYLAAVRKRFSRWILDTSNRSYDQAWLDYQYEIGLRHHRTKKNQTDNVESVPNIGYRYLVAFIYPITATMKPFLARKGHTPEEVEKM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21584 for 463 contacts (-46.6/contact) +
2D Compatibility (PS) -8013 + (NN) 2702 + (LL) 7228
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -25467.0 ( -55.00 by residue)
QMean score : 0.032
|
|
|