Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDVFKNIILASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQ-DLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAGFDPGVTNAYVAHAQRHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
| 1E5L Chain:A ((5-133)) | --SVLMLGSG---FVTRPTLDVLTDSGIKVTVACRTLESAKK-----LSAGVQHSTPISLDVNDDAALDAEVAKHD--LVISL-IPYTFHATVIKSAIRQKKHVV-TTSYVSPAMMEL--------DQAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAAGGKIKTFLSYCGGLPAPESSDNPLGYKFSWSSRGVLLALRNAASFYKDGKVTNVAGPELMATAKPYFIYPGFAFVAYPNRDSTPYKERYQIPEADNIVRGTLRYQGFPQFIKVLVDIGFLSDEEQPFLKEAIPWKEATQKIVKASSASEQDIVSTIVSNATFESTEEQKRIVAGLKWLGIFSDKKITPRGNALDTLCATLEEKMQFEEGERDLVMLQHKFEIENKDGSRETRTSSLCE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79772 for 969 contacts (-82.3/contact) +
2D Compatibility (PS) -13990 + (NN) -8063 + (LL) 1560
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -109765.0 ( -113.28 by residue)
QMean score : 0.468
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