Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MCGIVGYIGDSEKKSILLEGLKELEYRGYDSAGLAVLSA-NRLEVFKTQGKLENLRTELKNKEFLNFGVSIAHTRWATHGKPSSANAHPHFTENLALVHNGIIENYASLKKELENKGHAFLSQTDTEVIAHLLEETLKSEGDLLKAFEKSISLLKGSYAILMLHKRAKESLFYAKSSSPLIVGKGKEGVFFASSLSVLAPKVDQFVILEENSVGQISLE--NFKDLNNIENMKDYAFENKDY---SKGNFRNYLEKEIYEQHSSLLECLEGRLEALSV-YCEIDP---EFLENVSEITLCSCGSSYHASLASVYLFERLAKIRARAILASEYRYAHFKSNPNELFIAISQSGETADTLEALKLAKAQG-LKTISLCNAPFSMMSRISDHTLLIRAGVERSVASTKAFSSQVMLLWLLSVYLGKQLG-TISKEEERIQAKNMLNSVKAMKVEPKLHE--KIKRLSKRYLHGHGFFYIGRDVFYPLALEGALKLKEISYLHAEGYASAEMKHGPIALVDSNLFTIALLSKHLLFDKTKSNIEELSARDSTICVLSSEILE-IADD---FIQLEESESYMEEFFRMNLAMQLLALEIAMRLNHDVDHPRNLAKSVTVE |
3OOJ Chain:A ((1-608)) | -AGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQML-AQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPS----RIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIF-YTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OOJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291059 for 5419 contacts (-53.7/contact) +
2D Compatibility (PS) -63016 + (NN) -24356 + (LL) 1016
1D Compatibility (HY) -45600 + (ID) 12750
Total energy: -435765.0 ( -80.41 by residue)
QMean score : 0.500
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