Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIGSYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQETTIAEAMQAMQAQATVLEIDASKKFAKMQETLDFIAERLKGVKKKKGVELFHKANKIS--GHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSPLTPEDVLNNPKFSTIKAIKNKQVYKLP--TMDIGGPRAPLISL---FIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 3PSH Chain:A ((170-316)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLADRLGDVSADKRVRTYMANPDLGTYGSGKYTGLMMEHAGAYNVAAATIK-GFKQVSLENVLEWNPAVILVQDRYPDVVPQILNDQGWANIQALKDKKVFLMPEYAKAWGYPMPEALALGEVWLAKALYPQRFQDVDLDKMVNDYYQKFYRTSYKPD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71510 for 1027 contacts (-69.6/contact) +
2D Compatibility (PS) -14526 + (NN) -2194 + (LL) 16180
1D Compatibility (HY) -11600 + (ID) 1900
Total energy: -85550.0 ( -83.30 by residue)
QMean score : 0.602
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