Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDP-ERIKPMSSDHVAALNVELLK-------KLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIVEVMEDIDAQAKALEVDASKKLAKMQETLDFIKERLKNVKKKKGVELFHKANKIS--GHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLSPEDVLNNPKFSTIKAIKNKQVYKLP--TMDIGGPRAPLISL---FIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3PSA Chain:A ((82-316)) | -----------------------------------------------------------------------------ALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNP----TLTDEDKAYNDGLKQGIELIA----EVFEKKQQGDELVKA--AFANRKL---------LADRLGDVSADKRVRTYMANPDLGTYGSGKYTGLMMEHAGAYNVAAATIK-GFKQVSLENVLEWNPAVILVQDRYPDVVPQILNDQGWANIQALKDKKVFLMPEYAKAWGYPMPEALALGEVWLAKALYPQRFQDVDLDKMVNDYYQKFYRTSYKPD------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66521 for 1621 contacts (-41.0/contact) +
2D Compatibility (PS) -23202 + (NN) -3029 + (LL) 9120
1D Compatibility (HY) -15200 + (ID) 3150
Total energy: -101982.0 ( -62.91 by residue)
QMean score : 0.419
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