Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILSIESSCDDSSLAL----TRIEDAKLIAHFKISQEKHHSSYGGVVPEIASRLHAENLPLLLERVKISLNKDFSKIKAIAITNQPGLSVTLIEGLMMAKALSLSLNLPLILEDHLRGH--VYSLFINEKQTRMPLSVLLVSGGHSLILEARDYEDIKIVATSLDDSFGESFDKVSKMLDLGYPGGPIVEKLA---------LDYAHPNEPLMFPIPLKNSPN---LAFSFSGLKNAVRLEVEKNAHNLNDEVKQK----IGYHFQSAAIEHLIQQTKRYF-----KIKRPKIFGIVGGASQNLALRKAFEDLCAEFDC-ELVLAPLEFCSDNAAMIGRSSLEAYQKKRFIPLEKADISPRTLLKNFE |
| 3WUH Chain:A ((11-363)) | -VLAIETSCDDTCVSVLDRFSKSAAPNVLANLKDTLD------------KAHIHHQARIGPLTERALIESNAR-EGIDLICVTRGPGMPGSLSGGLDFAKGLAVAWNKPLIGVHHMLGHLLIPRMGTNGKVPQFPFVSLLVSGGHTTFVLSRAIDDHEILCDTIDIAVGDSLDKCGR--ELGFKGTMIAREMEKFINQDINDQDFAL---KLEMP--------RNMLSFSFSAFITALRTNLTKLGKT-----PEREIRSIAYQVQESVFDHIINKLKHVLKSQPEKFKNVREFVCSGGVSSNQRLRTKLETEL-----FNFYYPPMDLCSDNSIMIGWAGIEIWESLRLV--SDLDICPIRQWPLND |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WUH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156073 for 2427 contacts (-64.3/contact) +
2D Compatibility (PS) -31305 + (NN) -12569 + (LL) 1488
1D Compatibility (HY) -21600 + (ID) 4850
Total energy: -224909.0 ( -92.67 by residue)
QMean score : 0.470
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