Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNEMEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVELPQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLAQKGIKITAQMVPSEDAVEFANLLKK
2JZO Chain:D ((168-320))
---------RIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISK
General information:
TITO was launched using:
RESULT:
Template:
2JZO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99578 for 1102 contacts (-90.4/contact) +
2D Compatibility (PS) -16579 + (NN) -5065 + (LL) 260
1D Compatibility (HY) -14400 + (ID) 2700
Total energy: -138062.0 ( -125.28 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_2JZO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JZO-query.scw
PDB file :
Tito_Scwrl_2JZO.pdb
: