Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKT-----------EQMG---------YNYQLLHLVGKDSELQQSHFRKTFFENRVLISGEQLNEFVWRG------------GEVIGGNIRCFLKLAGTNFMPDFT-NKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF |
| 3TYX Chain:A ((61-321)) | ------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLL-HDQALPYNIKQPLFWSDESINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKM-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -97394 for 1721 contacts (-56.6/contact) +
2D Compatibility (PS) -24236 + (NN) -7924 + (LL) 4884
1D Compatibility (HY) -15200 + (ID) 3350
Total energy: -143220.0 ( -83.22 by residue)
QMean score : 0.380
|
|
|