Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVWLE----IEPGKSNP--TPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEA--LRHLNSYPTSILAETQTELTGKM-VLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE |
| 2YHY Chain:A ((31-311)) | -----SALAVDLGGTNLRVAIVSMKGEIVK-KYTQFNPKTYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLH----LPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSLDGPD-CSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMS-----AVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLA--SHYIHIVKDVIRQQAL------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YHY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134523 for 2192 contacts (-61.4/contact) +
2D Compatibility (PS) -29015 + (NN) -18393 + (LL) 3336
1D Compatibility (HY) -19200 + (ID) 3950
Total energy: -201745.0 ( -92.04 by residue)
QMean score : 0.470
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