Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQYVNARYMLSDE--IRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELE-RKDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYL--DETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPNDELAREKLQQLYPNCEVVGVKAREILLGGGNIHCITQQVPR |
| 3HVM Chain:A ((3-329)) | -------------RMLAEFEKIQAILMAFPHEFSDWAYCIKEARESFLNIIQTIAKHAKVLVCVHTNDTIGYE-MLKNLPGVEIAKVDTNDTWARDFGAISIEN-HGVLECLDFGFNGWG-----LKYPSNLDNQVNFKLKSLGFLKHPLKTMPYVLEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYG-YLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTPYKLIPLEIPKAIF-----------------DENQQRLPATYVNFLLCNDALIVPTYNDPKDALILETLKQHTP-LEVIGVDCNTLIKQHGSLHCVTMQL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151083 for 2807 contacts (-53.8/contact) +
2D Compatibility (PS) -35435 + (NN) -17737 + (LL) 1188
1D Compatibility (HY) -25200 + (ID) 5100
Total energy: -233367.0 ( -83.14 by residue)
QMean score : 0.467
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