Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNQKIVVALGGNAILSSDASAE--AQRSALEETAEYLVQFIENGDDLIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHGLDKVAVSLITQVVVDKDDPAFEKPTKPIGPFLNKEEAEKEMAET-GAIFLEDAGRGYRKVVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEKLAELIDADLLVILTGVENVYINYNQPNQKKLEQVTVSELEKYIDEKQFAAGSMLPKIEAATAFVKERPHAKAIITSLENIGAMLERGAGTVIVAG |
4JZ8 Chain:A ((6-315)) | --KTVVIALGGNAMLQAKEKGDYDTQRKNVEIAASEIYKIHKAGYKVVLTSGNGPQVGAIKLQNQAAAGV-SPEMPLHVCGAMSQGFIGYMMSQAMDNVFCANNEPANCVTCVTQTLVDPKDQAFTNPTKPVGRFYTEQEAKDLMAANPGKILREDAGRGWRVVVPSPRPLEIVEYGVIKTLIDNNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACINYKKPDERKLEEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKM-SIITSLSTAVDALNGKCGTRII-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JZ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154704 for 2671 contacts (-57.9/contact) +
2D Compatibility (PS) -33388 + (NN) -12409 + (LL) 228
1D Compatibility (HY) -26400 + (ID) 6650
Total energy: -233323.0 ( -87.35 by residue)
QMean score : 0.554
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