Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQ---YKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVDDKGDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCEL----ERIDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFYL-DETNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEKLYPDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE |
| 1ZBR Chain:A ((9-336)) | -----------------EWAPQEAVQLTWPHDRTDWAYMLDEVETCFVRIATAILRHERL-IVVCPDRKRVFGLLPPELHHRLYCFELPSNDTWARDHGGISLLAD-GRPMIADFAFNGWGM-----KFAAHHDNLITRRLHALGLFAEGVTLDNRLAFVLEGGALETDGEGTLLTTDSCLFEPNRNAGLSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIVYVRSEDPSDEHYS------DLTAMEQELK-------ELRRPDGQPYRLVPLPMAEALY-----DGADRLPATYANFLIINGAVLVPTYDSHLDAVALSVMQGLFPDREVIGIDCRPLVKQHGSLHCVTMQYP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 78001 for 2622 contacts (29.7/contact) +
2D Compatibility (PS) -32385 + (NN) 360 + (LL) 2408
1D Compatibility (HY) 10800 + (ID) 1200
Total energy: 57984.0 ( 22.11 by residue)
QMean score : 0.074
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