Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSAE |
| 3QRX Chain:B ((11-21)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGLPALISWIK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2486 for 35 contacts (-71.0/contact) +
2D Compatibility (PS) -994 + (NN) 873 + (LL) 17080
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 13073.0 ( 373.51 by residue)
QMean score : -0.189
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