Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVN-RTFTNQQGER---EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
1UE1 Chain:A ((7-106))
----ITIVGNLTADPELRFTPSGAAVANFTVASTPRIYD-----WKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEI------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50584 for 576 contacts (-87.8/contact) +
2D Compatibility (PS) -9885 + (NN) -2154 + (LL) -848
1D Compatibility (HY) -5600 + (ID) 2000
Total energy: -71071.0 ( -123.39 by residue)
QMean score : 0.591
(partial model without unconserved sides chains):
PDB file :
Tito_1UE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE1-query.scw
PDB file :
Tito_Scwrl_1UE1.pdb
: