Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISN-DNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAG-DVTSWKIERELDTTYYEVTVKQDNNK-YEIKLNAKTLEILQTEQDD |
| 2GU3 Chain:A ((12-133)) | ------------------------------------------------------------GHEAAAAEAKKETDLAHVDQVETFVGK-EKYYVVKGTDKKGTALYVWVPADKKAKIL-------------------SKEAKEGISEDKAAKIIKDEGLVSKQKEVHLAREGNVLLWEVTYLDKEGQYSLSYVDFTTGKILKN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8833 for 877 contacts (10.1/contact) +
2D Compatibility (PS) -12575 + (NN) 464 + (LL) 2640
1D Compatibility (HY) -400 + (ID) 1100
Total energy: -2138.0 ( -2.44 by residue)
QMean score : 0.359
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