Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQ-NIPSNNWIVLGTF-GF-ILLNMFL----FAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE
4PD9 Chain:A ((304-382))---------------------------------------------------------------------------------------------LLGWLFAPLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFALCGFANLSSIAILL---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4PD9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44639 for 440 contacts (-101.5/contact) +
2D Compatibility (PS) -7180 + (NN) -458 + (LL) 11728
1D Compatibility (HY) -5600 + (ID) 1350
Total energy: -47499.0 ( -107.95 by residue)
QMean score : 0.209

(partial model without unconserved sides chains):
PDB file : Tito_4PD9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PD9-query.scw
PDB file : Tito_Scwrl_4PD9.pdb: