Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETIDVFSPVELYLLLSPIEAQHLFGVPDKLTFLLKGEDVFAEGFDRLKSKGILNEAGELTDGGGFLIDSLIEYYQSKKYVRMNQLMFAFLEKTPNELLVMIEITPQKEYRFERMNKI--YALEMIKDFFPLIRREPGERETEFLKEELTNEERKRATAFDPEKNFISMEFFHVDEEPKEKNNAKYYKQYLAFEMEDKLMMVDVVNDTYYRGSQYALLKLLFDELEFPYEEAK |
4KZZ Chain:R ((38-104)) | -------------------------------------------------------------------------------------------------------IAIIPSKKLR----NKIAGYVTHLMKR----IQRGP----VRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7908 for 242 contacts (32.7/contact) +
2D Compatibility (PS) -7125 + (NN) -5253 + (LL) 13312
1D Compatibility (HY) -4400 + (ID) 1250
Total energy: 3192.0 ( 13.19 by residue)
QMean score : 0.341
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