Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRGQEEIDKEQYQVLFIKERLIPCVLGAVIGDCLGVPVEFKDREYLKQNPIV--EMIGYGTYNQPKGTWSDDSSLTFALMESLIS--GYDINRIVNNMVSFMDDGFWTPYGEVFDIGSVTRESLNRYKN-GVSVFECGGKDNFDNGNGAIMRIMPLVFYLGKDFSFGKKNKITEEV---TRITHAHPRSILGSYVYIELLQNLFANMDKKLAYEEMQNYIRKNYSDYPFKDELQYYNNILEGNLYELKESNIKSSGYVVDTLEASIWAFLTTNSYKEAVLKAVNLGGDTDTIAFITGSLAGIYYKMEQIPVNWIDQIAKKEDILNLCNRFIESLIKQ |
| 2WOD Chain:A ((11-280)) | ----------------VHDRALGAFLGLAVGDALGATVEFMTKGEIAQQYGIHRKMTGGGWLRLKPGQITDDTEMSLALGRSLAAKGTLDVADICEEFALWLKS-------RPVDVGNTCRRGIRRYMHEGTTTAP---YSEGDAGNGAAMRCLPAALA-----TLGHPADLEPWVLAQARITHNHPLSDAACLTLGRMVHHLIGGRGMKACREE-ANRLVHQHRDFHF----EPYKG--------------QSSAYIVDTMQTVLHYYFVTDTFKSCLIQTVNQGGDADTTGALAGMLAGATYGVDDIPSGWLSKLDMK----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WOD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128376 for 2353 contacts (-54.6/contact) +
2D Compatibility (PS) -27500 + (NN) -8476 + (LL) 4452
1D Compatibility (HY) -10400 + (ID) 3900
Total energy: -174200.0 ( -74.03 by residue)
QMean score : 0.467
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