Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNL-GLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 2KOG Chain:A ((75-101)) | --------------------------------------------------------------------------------------------------------------------------------------------------------SQFETSAAKLKRKYWWKNLKMMIILGV-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6672 for 93 contacts (71.7/contact) +
2D Compatibility (PS) -2771 + (NN) -1715 + (LL) 22828
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 23664.0 ( 254.45 by residue)
QMean score : 0.389
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