Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAEVDKSTIGEVEGVTFQSYFLIKNMLHTRVVGDLEKRLPVTLEKMVEYVESNRKEIITPIFIVLNYV------GNVPYVDVYVGIDPYDE
1R8E Chain:A ((217-277))
-------------------------YACIAYNFSP-EHYFLNLQKLIKYIADRQLTVVSDVYELIIPIHYSPKKQEEYRVEMKIRIA----
General information:
TITO was launched using:
RESULT:
Template:
1R8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45225 for 305 contacts (-148.3/contact) +
2D Compatibility (PS) -6100 + (NN) -1930 + (LL) 2028
1D Compatibility (HY) -4800 + (ID) 250
Total energy: -56277.0 ( -184.51 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_1R8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R8E-query.scw
PDB file :
Tito_Scwrl_1R8E.pdb
: