Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEFHQLVKEDLLIYSWIIK----NFHLTRQKLMAGGEITMNR---EQVIVMEKGLLVQVN--EEGKNDLYRVFIDQRIIFTTK--------GDITLTALEDTSYSIIRTDELIGKLEDQHLLPTFFLQIAEDFEKGLDWQR-TLISVDPAERAEMILVKIIERYEINSENKPEFPRWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQASCA
3LA7 Chain:A ((26-234))
------------DKALANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVPCADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHK-------
General information:
TITO was launched using:
RESULT:
Template:
3LA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114561 for 1410 contacts (-81.2/contact) +
2D Compatibility (PS) -20128 + (NN) -3229 + (LL) 1892
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -143176.0 ( -101.54 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_3LA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LA7-query.scw
PDB file :
Tito_Scwrl_3LA7.pdb
: