Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLNELSKSDLLLIFQAL---SDPIRLDIFLCLLKSKEKRFS--GTTYNISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNQELVSLISHFFEECGEKDE
3F6V Chain:A ((26-105))
--------------VLDQLEVAAEPTRRRL-VQLLTSGEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKDGRFRYYRLDPQGLAQLRALFD-------
General information:
TITO was launched using:
RESULT:
Template:
3F6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42504 for 478 contacts (-88.9/contact) +
2D Compatibility (PS) -7745 + (NN) -2506 + (LL) 1488
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -58267.0 ( -121.90 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_3F6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6V-query.scw
PDB file :
Tito_Scwrl_3F6V.pdb
: