Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAE---ELVAQMVEKWRPYRTEVKG-IAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFG--RTGSA-VELIKRIASKKNLP--------NKKDGEHVFELINQGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGISAQPVVVERLNDAVAEIKAANPYH----AAQPKIVTCHFQNDANLYGALYNFFLQMDAQNKR |
| 2AP1 Chain:A ((25-322)) | MYYGFDIGGTKIALGVFDSTRRLQWEKRVPTPHTSYSAFLDAVCELVEE-ADQRFGVKGSVGIGIPGMPETEDGTLY-AANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCGCGQMGCIENYLSGRGFAWLYQHYYDQSLQAPEIIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQLAERL-------PRHLLPVARAPRIERARHGDAGGMRGAAF------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180617 for 2328 contacts (-77.6/contact) +
2D Compatibility (PS) -30234 + (NN) -14211 + (LL) 1960
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -242902.0 ( -104.34 by residue)
QMean score : 0.485
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