Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKTKQNAAIFDLVGNEAILTY--QG-Q--QFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQY--NVKSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFP--LVELEDLGNKNGLELVNLCLEEFGAILFADN-KKLYFYDEKSWY-VKTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILD--VPETALTISYKGKEP------VSERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 3CDD Chain:A ((54-342)) | ----------------------------------------------------PIKQGQACTVDIGGERVITGYVDDWVPSYDESTITISVSGRDKTADLVDCSIDYPSGQ--FNNQTLTQIADIVCKPF--GIKVIVNTDVGEPFQRIQIEQGETPHELLARLAKQRGVLLTSDTFGNLVITR---ASKTKAGVSLILGDNVKAARGRFSWRQRFSKFTIKAA----------------KADVTDSEIGRYRPL---IIVNEEVT-AEGAAKRGQWERQRSIGKSNMAEYTVTGWRIPQTGKLWNINTLVPVIDEIMGLDEE-LIASILFSEDDAGRLAVISVVRPDAM------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CDD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44701 for 1682 contacts (-26.6/contact) +
2D Compatibility (PS) -26431 + (NN) -5214 + (LL) 9172
1D Compatibility (HY) 4000 + (ID) 1100
Total energy: -64274.0 ( -38.21 by residue)
QMean score : 0.318
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