Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATEIRVLKNVDDTVFYPKTHVTAVEGLDSATTTTSGLMPASDKTKLNGI-EANAEKNNVTAIDIANWNKKQDAILVSENGSNFKITVTNAGELKATKVE
2RK8 Chain:A ((546-594))
------------------------IEGEDSAKLTPIGYVPKEDALNLKGLGDVNVEE--LFGISKEFWEKEVEEI-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2RK8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6548 for 203 contacts (32.3/contact) +
2D Compatibility (PS) -5005 + (NN) -1481 + (LL) 3492
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -96.0 ( -0.47 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_2RK8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RK8-query.scw
PDB file :
Tito_Scwrl_2RK8.pdb
: