Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVILKFGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLASGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISILENFVRMGMKVPEVLKNLILIFDAKSGEDEEKHDKDMD
3P04 Chain:A ((108-119))
----------------------------------IVDFAAGLCFAL----------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3P04.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2286 for 38 contacts (-60.2/contact) +
2D Compatibility (PS) -1247 + (NN) 233 + (LL) 11372
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 6722.0 ( 176.89 by residue)
QMean score : -0.239
(partial model without unconserved sides chains):
PDB file :
Tito_3P04.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P04-query.scw
PDB file :
Tito_Scwrl_3P04.pdb
: