Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGS-----PIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFD---EGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKG--TNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHV------------------------PALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNKAIDDKESELGNMITDAQ-----RYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGNILQVVEMTGADILEALNQ---QYLSNQTYFLQISGLKYTFTDTDD-------LDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVT-AIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 4H1Y Chain:P ((23-542)) | -------------------------------------PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIR----RAEP-----NVLLLDAGDQYQGTIWFT-VYKGAEVAHFMNALRYDAMALGNHEFDNGVEGLIE--------------PLLK-----EAKFPILSANISASGPLASQISGLYLPYKVLPVGDEVVGIVGYTSKETP--FLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMDKLIAQKVRGVDVVVGGHSNTFLYTGNPPS--KEVPAGKYPFIVTSDDG-----------------------RKVPVVQAYAFGKYLGYLKIEFDER-GNVISSHGNPILLDS-SIPEDPSIKADINKWRIKLDDYSTQELG---KTIVYLDGS--SQSCRFRECNMGNLICDAMINNNLRHADEMFWNHVSMCILNGGGIRSPIDER---NDGTITWENLAAVLPFGGTFDLVQLKGSTLKKAFEHSVHRYGQSTGEFLQVGGIHVVYDLSRKPGDRVVKLDVLCTSCRVPSYD--PLKMDEVYKVILPNFLANGGDGFQMIKDELLRHDSGDQDINVVSTYISKM----KVIYPAVEGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4H1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112815 for 3936 contacts (-28.7/contact) +
2D Compatibility (PS) -50686 + (NN) -16591 + (LL) 10716
1D Compatibility (HY) -32800 + (ID) 7150
Total energy: -209326.0 ( -53.18 by residue)
QMean score : 0.436
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