Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLA-----FEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK |
5BQY Chain:B ((66-171)) | -----------------------------------------------------------------------------------------------------------------------------------VGHEFSNLERRIDNLNKRMEDGFL-DVWTYNAELLVLLENERTLDLHDANVKNLHEKVRSQLRDNANDLGNGCFEFWHKCNNECMESVKNGTYDYPKYQKESRLNRQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5BQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 12855 for 499 contacts (25.8/contact) +
2D Compatibility (PS) -10493 + (NN) -18 + (LL) 21716
1D Compatibility (HY) -3200 + (ID) 1200
Total energy: 19660.0 ( 39.40 by residue)
QMean score : 0.195
|
|
|