Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNESNGSMELYLREHTEEIINNWLSKIYENTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREFVTAVGDFCIHNDEVSKCEFSSSMAMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFDDALGEMLTNLVTMLKLLGVEAFISG---IQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI |
1VC1 Chain:A ((12-91)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDKAIVRVQGDIDAYNSSELKEQLRNFISTTSKKKIVLDLSSVSYMDSA---GLGTLVVILK----DAKINGKEFILSSLKESISRI----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49895 for 503 contacts (-99.2/contact) +
2D Compatibility (PS) -8188 + (NN) -3429 + (LL) 15212
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -53550.0 ( -106.46 by residue)
QMean score : 0.340
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