Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVIVFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGTTLCGVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEEDGTNALKQGLITLFISACGYVGLVVLIQGFKIDGINAILPQAIGMVISALIMTHSGGTEKRFNKRTLLLTIPGVIWAAGNVAMVHANQLVGVATGFSLSQLGVVISTIGGIILLKEKKTQKEMLFVIVGVVLVVLGGILIGVAKGA |
| 1IMB Chain:A ((155-206)) | --------------TKSLLVTELGSSRTPETVRMVLSNMEK-----LFCIPVHGIRSVGTAAVNMCLVATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IMB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26088 for 249 contacts (-104.8/contact) +
2D Compatibility (PS) -5465 + (NN) -1261 + (LL) 20724
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -17290.0 ( -69.44 by residue)
QMean score : -0.033
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