Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKFTKLMQGYLHLIEGKNEKIKPILLETKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENWNRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGDSILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRVNSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAHISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILCEKKEKNDVQIWEALVPPLEEVGEYTYYFQATMKDQTTLTSDDYKVEPIWKHWSEEAAICETEQGLMVLFKENPSSIIPVEFTVKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEIIVSNNPVRLEVHFKGKLILESHKIYPALQWYTDKTGTINKVKLHLDAPKEEEYYGFGERYNALGQRGNVLDCFVYNQYRDQGTRT---YIPMPFYHTNRDYSVFVDTARYTSFDLGNQLADKHTITVEINGCDTDICLLMGDIRSAVAN-YMKKTGKPAMVPVWALGPWMSSN---NWDRESVVRNEVETTQELQIPSTVVVLE-------QWSDEATYYMFNDAEYDEKAPSEAYSYDEIRFPSWGRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDGSPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEGLQFADGRRGDEMRNLYPNDYVEAYYQFAQ----QNEGMTFSRAGYTGAQNFPAHWAGDERSTFDAFRRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTAELFIRSAEMATFCPIMQYHAESKAEFNQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDYKEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVSGPTLRKCKADKEEIPVFVRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKVYLDGDFTEEITDHLFGKWLVKVTENADEVIVSVQTNTASYEVEVIGTTKKVQIKKGR |
| 2F2H Chain:A ((154-664)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDLGVGETVYGLGERFTALVRNGQTVETW----NRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVGSEKVSKVQFSVESE--YLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYD-EATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCD--------------------FEWDPLTFP------DPEGMIRRLKAKGLKICVW---INPYIGQKSPVFKE-----LQEKGYLLKRPDGSLWQW-DKWQPGLAIYDFTNPDACKWYADKLKGLVAMGVDCFKTDFGERIPTD-VQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFENTAP-AHVYKRWCAFGLLSSHSRLHGSKSY-----RVPWAY-----DDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTE-AGDVQFYLPEGRWTHLWHNDELDGSRWHKQQHGFLSLPVYVR------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2F2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -238228 for 4338 contacts (-54.9/contact) +
2D Compatibility (PS) -52197 + (NN) -16480 + (LL) 42628
1D Compatibility (HY) -40400 + (ID) 8500
Total energy: -313177.0 ( -72.19 by residue)
QMean score : 0.462
|
|
|