Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKY-QNIDGVKSVSPELSGQ-VN-ATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLN----GMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLL----KDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE |
| 3IS6 Chain:A ((43-204)) | -----------------------------------------------------------------------------VAPAIQEEIPGVELATRTTLYGTSKMILEDNKTYETKTLLAEPAFLDMFGVELIAGVRDSALR---DNMTCLISESLARKMGG--DVLGKRLRPAESKSDRAITIGGVFEDLPHNSS--IQADMLLPITWMPAESLNNWIGNDRYIAYVRLRPGVSPESLDEALLEMQK----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15735 for 1039 contacts (-15.1/contact) +
2D Compatibility (PS) -15679 + (NN) -623 + (LL) 18336
1D Compatibility (HY) 0 + (ID) 1050
Total energy: -14751.0 ( -14.20 by residue)
QMean score : 0.302
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