Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFR---DIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
1CVR Chain:A ((27-69))
-------------------------------------------FVDWKNQRGLRTEVKVAEDIASPVTANA---IQQFVKQEYEKEGND----------------
General information:
TITO was launched using:
RESULT:
Template:
1CVR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2213 for 164 contacts (13.5/contact) +
2D Compatibility (PS) -4102 + (NN) -1182 + (LL) 5248
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -2223.0 ( -13.55 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_1CVR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CVR-query.scw
PDB file :
Tito_Scwrl_1CVR.pdb
: