Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
2BG9 Chain:B ((437-468))
-----RLFLYIFITMCSIGTFSIFLDASHNVPPDNPF----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2BG9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21774 for 135 contacts (-161.3/contact) +
2D Compatibility (PS) -3243 + (NN) -2699 + (LL) 5296
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -26420.0 ( -195.70 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_2BG9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BG9-query.scw
PDB file :
Tito_Scwrl_2BG9.pdb
: