Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVVSGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGSSDYRT--MDVDMPLAIVIGSEGFGMSRLVREKCDFLVHLP-----MRGKVTSLNASVAASLLLYEVYRKRFPLEK
2I6D Chain:A ((106-256))
-----------------------------------------------------------------------------------------------------LLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVFSPKVVQASMGALARVQPTPLKNTVDTLAYFRRQGIPVYGAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSV----ESLNVAIATAILCSE-WRRR-----
General information:
TITO was launched using:
RESULT:
Template:
2I6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102188 for 1105 contacts (-92.5/contact) +
2D Compatibility (PS) -15325 + (NN) -6070 + (LL) 9540
1D Compatibility (HY) -10000 + (ID) 2200
Total energy: -126243.0 ( -114.25 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_2I6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I6D-query.scw
PDB file :
Tito_Scwrl_2I6D.pdb
: