Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVEEVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVTKPFSNRELIARVKANLRRHSQVSSSTAEEEENSELEIGSLIIHPDAYVASKRGETIELTHREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHPAWLVTRRGVGYYLRNPEQE
1NXO Chain:A ((2-119))
---KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLM---IDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS--------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1NXO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82730 for 908 contacts (-91.1/contact) +
2D Compatibility (PS) -12769 + (NN) -7856 + (LL) 8764
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -112141.0 ( -123.50 by residue)
QMean score : 0.768
(partial model without unconserved sides chains):
PDB file :
Tito_1NXO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NXO-query.scw
PDB file :
Tito_Scwrl_1NXO.pdb
: