Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTTIQQLVKHVSVREFKNERLSDETKQHLLTAARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFYVFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIGGIRNDIGKVAELLNLPPFTIPVFGLTVGVPEYKNQVKPRLLLENQVGENQYPHEQFTDLKAYEELTKDYYALREKNQHQTSWGDKNVEFFEEIRRPEIASFLKKQGFTLD
3GE5 Chain:A ((39-172))
------------SVRKFIDRPVEEEKLMAILEAGRIAPSAHNYQPWHFLVVREEEGRKRLAPCSQQPWFPGAP-IYIITLGDHQRAWKRGAGD--SVD------------IDTSIAMTYMMLEAHSLGLGCTWVCAF--DQALCSEIFDIPSHMTPVSILALG----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GE5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88305 for 1032 contacts (-85.6/contact) +
2D Compatibility (PS) -14675 + (NN) -6873 + (LL) 7876
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -112777.0 ( -109.28 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_3GE5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE5-query.scw
PDB file :
Tito_Scwrl_3GE5.pdb
: