Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTE--IKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPS-REAVLKAVSLARKNDVVVAFELDYRPYTWKNSEET--AVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
| 2V78 Chain:A ((3-303)) | -----------DVIALGEPLIQFNSFNPG-PLRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNESF-TGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKSR----SLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLD-VTDPDEAYRKYK-ELGVKVLLYKLGSKGAIAYKDNVKAFK-DAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLED--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136416 for 2723 contacts (-50.1/contact) +
2D Compatibility (PS) -31228 + (NN) -6866 + (LL) 3212
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -193198.0 ( -70.95 by residue)
QMean score : 0.480
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