Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL |
| 2WW9 Chain:B ((54-70)) | ----------VGIGFIAVGIIGYAIKL-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5387 for 61 contacts (-88.3/contact) +
2D Compatibility (PS) -1577 + (NN) 236 + (LL) 8592
1D Compatibility (HY) -2400 + (ID) 200
Total energy: -736.0 ( -12.07 by residue)
QMean score : -0.007
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