Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQDLQNRLVDQEILHGSDLLDEIHEVKQNNEQLIIELNTKYHTKKEVTKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIEDNVLIGPGARLVTVNHLVSPKKRRG--LRVAPICVKKNAWIGANTTILSGVTIGENAIVAADATVTKDVPPNVIVAGSPAKQIRKIIEE
1KRR Chain:A ((16-185))
------------------TDMCEGLPEKRLRGKTLMYEFNHSHPSEVEKRESLIKEMFATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGDNSVIGAGSIVTKDIPPNVVAAGVPCRVIREI---
General information:
TITO was launched using:
RESULT:
Template:
1KRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91540 for 1289 contacts (-71.0/contact) +
2D Compatibility (PS) -18428 + (NN) -6791 + (LL) 2056
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -128903.0 ( -100.00 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1KRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KRR-query.scw
PDB file :
Tito_Scwrl_1KRR.pdb
: