Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYLVTGATGGLGGYALNYLKELVPMSDIYAL-VRSKEKGADLKAAGFNIRVGDYSDAESMKQAFAGIDRVLFVSG--APGNRQV-EHENVINAAKKAGVSYIAYTSFAGADKSTSALAEDHFF--TEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYAAENGKVGWALKREYAEVAAKAVAGAGFPEI----LELSGPLMTYEELTKALKEATGKDFDVISSDDKGFVENLVSVGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALG-KPLTNRVDALRELLK |
| 3E48 Chain:A ((5-272)) | ----LTGATGHLGTHITN--QAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYY-ADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRN---DIARGVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDE---PKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQT----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70008 for 2048 contacts (-34.2/contact) +
2D Compatibility (PS) -27442 + (NN) -13543 + (LL) 2236
1D Compatibility (HY) -16400 + (ID) 3700
Total energy: -128857.0 ( -62.92 by residue)
QMean score : 0.437
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