Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVPEGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEVRSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLN--NDERITLSMSPVFVALFACSFAVFLGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGYFSIRKNKKWMKNFEFKKVDEEVK |
4HZU Chain:S ((1-164)) | MTKGSLKENTIAAVLIAMTVALSILVV-----------IPIPATKGIVTLCEVGIYTSAILYG------------------------------------------------------RRMGLLVGGASGFLIDILTGYPVWCLFSLVIHGTQGLVVGWLLPRHHKGIRSMLLPLLVGSLVMVIGYCLATTLLFGWPAGLASIFGNVVQVGFGAGVTLSIVGPLTRLKPD-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93101 for 1305 contacts (-71.3/contact) +
2D Compatibility (PS) -17105 + (NN) -5628 + (LL) 8292
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -113792.0 ( -87.20 by residue)
QMean score : 0.360
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