Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKRLLLASRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRSFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPATFGKVRARQQVVYPLFKKQFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPNVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFE------NSATSRLSVIFYGASHPNF--------ELSLRAAYSFIRKISEENGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSL--T-LQESLDSNLHSGEKILLFTPCMDTM----LMQKVTRLTD---NKQLQIIT-FQSEHSKAMDAPAIFLEQASLLSRWERETK |
2NVO Chain:A ((332-500)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RGKGTWLPVPRVVDALEEAFTLAFGNVQPANTRHLLALDVSGSMTCGDVAGVPGLTPNMAAAAMSLIALRTEPDALTMGFAEQFRPL-GITPRDTLESAMQKAQS-VSFGGTDCAQPILWAAQERLDVDTFVVYTDNETWAGQVHPTVALDQYAQKMGRAPKLIVVGLTAT-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50600 for 1033 contacts (-49.0/contact) +
2D Compatibility (PS) -15864 + (NN) -8512 + (LL) 18608
1D Compatibility (HY) 2800 + (ID) 500
Total energy: -54068.0 ( -52.34 by residue)
QMean score : 0.442
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