Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGSSYLVNPLWDLSRLDHSIGV----MLFIRKFGGSLEE-----------QIAGLLHDVSHTAFSHVVD---YALDFEEEDY-HEQ----IFEDFVKTSTIPAILEKYGYSFEGIFNDISKWKILEQEAPELCADRIDYTLQDLYRHGKISLAEVKEFLQALVMVDGRLYLANIALAEWFVAQYYSEVIDYFYDPLNVYSYEILAEAMRIAFQQETITTADLRLTDAELLAKLNANSDAREKIQLLASPHLEENEVDFTYHHKKKMRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ |
4RXP Chain:A ((31-176)) | --INDPIHGHIELHPLLVRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVHALGEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVMMFEHLINSNGIKPVMEQYG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61096 for 726 contacts (-84.2/contact) +
2D Compatibility (PS) -12009 + (NN) -1863 + (LL) 17724
1D Compatibility (HY) -12400 + (ID) 2250
Total energy: -71894.0 ( -99.03 by residue)
QMean score : 0.319
|
|
|