Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTS---GVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
2ZJ4 Chain:A ((54-181))
------------------------------------IKEIQRCRRLILIA-CGTSYHAGVATRQVLEELT--ELPVMVELASDFLDRNTPVF-RDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPE------IGVASTKAYTSQFVSLVM-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZJ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79861 for 988 contacts (-80.8/contact) +
2D Compatibility (PS) -13048 + (NN) -3891 + (LL) 5028
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -103972.0 ( -105.23 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJ4-query.scw
PDB file :
Tito_Scwrl_2ZJ4.pdb
: